DOI > 10.5291/ILL-DATA.8-03-824

This proposal is publicly available since 10/09/2019

Title

Sructural Study of Functional Nucelosome with Human Varinat Histones

Abstract

Nucleosome, which consists of histone octamer and DNA, is a fundamental unit for stable storage of genomic DNA. In an activation stage, such as transcription, recombination, repair, and replication, the nucleosome has to diverge from its stable structure: for example, on the active genes, genomic DNA must detach from the histone core to allow access of the transcription factors. It is expected that the trigger of the activation could be replacement of histones by the variant histones, accompanying with the structural alternation. Recently, we have focused on the variant nucleosome with H2A.Z histone, which is predominantly localized around the promoters of active genes. In this project, we will elucidate the configuration of DNA and structural modulation of histone octamer in H2A.Z nucleosome using small-angle neutron scattering with contrast variation technique.

Experimental Report

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Data Citation

The recommended format for citing this dataset in a research publication is in the following format:

Masaaki Sugiyama; HORIKOSHI Naoki; INOUE Rintaro; MARTEL Anne; PORCAR Lionel; VIGILD Martin and ZACCAI Joseph. (2014). Sructural Study of Functional Nucelosome with Human Varinat Histones. Institut Laue-Langevin (ILL) doi:10.5291/ILL-DATA.8-03-824

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Metadata

Experiment Parameters

  • Environment temperature

    300K (RT)
  • Experiment energy

    6A
  • Experiment moment

    0.008-0.2A^-1
  • Experiment res energy

    10%
  • Experiment res moment

    <30%

Sample Parameters

  • Formula

    • Canonical nucelosome
    • Nucleosome with one H2A.Z1
    • Nucleosome with two H2A.Z1s
    • Nucleosome with one H2A.Z2
    • Nucleosome with twoH2A.Z2
    • Nucleosome with one H2A.Z1 and one H2A.Z2